fix(serializer): wrap traverse_base

moving `begin` and `end_write` to the seriazlier due to the new
sqlite transport with batched writes necessitates a wrapper around
`traverse_base` so end/begin write can be called once at the top level.
just adding begin/end write to the original traversal method would make
tons of calls to `end_write` since the traversal is recursive

.circleci/config.yml

@@ -1,16 +1,16 @@
 version: 2.1
 
 orbs:
-  python: circleci/python@1.3.2
+  python: circleci/python@2.0.3
   codecov: codecov/codecov@3.2.2
 
 jobs:
   test:
     docker:
       - image: "cimg/python:<<parameters.tag>>"
-      - image: 'cimg/node:14.18'
-      - image: 'circleci/redis:6'
-      - image: 'cimg/postgres:12.8'
+      - image: "cimg/node:16.15"
+      - image: "cimg/redis:6.2"
+      - image: "cimg/postgres:14.2"
         environment:
           POSTGRES_DB: speckle2_test
           POSTGRES_PASSWORD: speckle
@@ -27,6 +27,7 @@ jobs:
           STRATEGY_LOCAL: "true"
           CANONICAL_URL: "http://localhost:3000"
           WAIT_HOSTS: localhost:5432, localhost:6379
+          DISABLE_FILE_UPLOADS: "true"
     parameters:
       tag:
         default: "3.8"
@@ -51,7 +52,7 @@ jobs:
 
   deploy:
     docker:
-      - image: "circleci/python:3.8"
+      - image: "cimg/python:3.8"
     steps:
       - checkout
       - run: python patch_version.py $CIRCLE_TAG
@@ -60,7 +61,7 @@ jobs:
 
 workflows:
   main:
-    jobs: 
+    jobs:
       - test:
           matrix:
             parameters:
@@ -70,7 +71,7 @@ workflows:
               only: /.*/
       - deploy:
           requires:
-            - test 
+            - test
           filters:
             tags:
               only: /[0-9]+(\.[0-9]+)*/

.devcontainer/docker-compose.yaml

@@ -1,7 +1,7 @@
 version: "3.3"  # optional since v1.27.0
 services:
   postgres:
-    image: circleci/postgres:12
+    image: cimg/postgres:14.2
     environment:
       POSTGRES_DB: speckle2_test
       POSTGRES_PASSWORD: speckle
@@ -10,7 +10,7 @@ services:
       #   - "5432:5432"
     network_mode: host
   redis:
-    image: circleci/redis:6
+    image: cimg/redis:6.2
     # ports:
     #   - "6379:6379"
     network_mode: host
@@ -27,6 +27,7 @@ services:
       STRATEGY_LOCAL: "true"
       CANONICAL_URL: "http://localhost:3000"
       WAIT_HOSTS: localhost:5432, localhost:6379
+      DISABLE_FILE_UPLOADS: "true"
     # ports:
     #   - "3000:3000"
     network_mode: host

.vscode/launch.json

@@ -4,6 +4,7 @@
   // For more information, visit: https://go.microsoft.com/fwlink/?linkid=830387
   "version": "0.2.0",
   "configurations": [
+    
     {
       "name": "Python: Current File",
       "type": "python",
@@ -13,10 +14,13 @@
       "justMyCode": false
     },
     {
-      "name": "Python: Test debug config",
+      "name": "Pytest",
       "type": "python",
-      "request": "test",
+      "request": "launch",
+      "program": "poetry",
+      "args": ["run", "pytest"],
       "console": "integratedTerminal",
+      "justMyCode": true
     }
   ]
 }

example/many_children.py

@@ -0,0 +1,63 @@
+from typing import List
+from specklepy.objects import Base
+from specklepy.api import operations
+from specklepy.transports.sqlite import SQLiteTransport
+import time
+from pathlib import Path
+import os
+import string
+import random
+
+
+class Sub(Base):
+    bar: List[str]
+
+
+def random_string():
+    letters = string.ascii_lowercase
+    return "".join(random.choice(letters) for _ in range(10))
+
+
+BASE_PATH = SQLiteTransport.get_base_path("Speckle")
+
+
+def clean_db():
+    os.remove(Path(BASE_PATH, "Objects.db"))
+
+
+def one_pass(clean: bool, randomize: bool, child_count: int):
+
+    foo = Base()
+    for i in range(child_count):
+        stuff = random_string() if randomize else "stuff"
+        foo[f"@child_{i}"] = Sub(bar=["asdf", "bar", i, stuff])
+
+    if clean:
+        clean_db()
+    transport = SQLiteTransport()
+    start = time.time()
+    hash = operations.send(base=foo, transports=[transport])
+    send_time = time.time() - start
+
+    receive_start = time.time()
+    operations.receive(hash, transport)
+    receive_time = time.time() - receive_start
+    return send_time, receive_time
+
+
+if __name__ == "__main__":
+    sample_size = 4
+
+    test_permutations = [
+        (True, True),
+        (False, False),
+        (False, True),
+        (True, False),
+    ]
+    for clean, randomize in test_permutations:
+        print(f"CLEAN: {clean}, RANDOMIZE: {randomize}")
+        for child_count in [10, 100, 1000, 10000]:
+            print(f"\tCHILD COUNT: {child_count}")
+            for _ in range(sample_size):
+                send_time, receive_time = one_pass(clean, randomize, child_count)
+                print(f"\t\tSend: {send_time} Receive: {receive_time}")

example/using_speckle_base.py

@@ -50,10 +50,10 @@ if __name__ == "__main__":
     )
     # support for dynamic attributes
     custom_sub.extra_extra = "what is this?"
-    debug(custom_sub.json())
+    debug(custom_sub)
 
     serialized = operations.serialize(custom_sub)
     deserialized = operations.deserialize(serialized)
     # the only difference should be between the two data is that the deserialized
     # instance id attribute is not None.
-    debug(deserialized.json())
+    debug(deserialized)

poetry.lock

@@ -1,23 +1,3 @@
-[[package]]
-name = "aiohttp"
-version = "3.7.4.post0"
-description = "Async http client/server framework (asyncio)"
-category = "main"
-optional = false
-python-versions = ">=3.6"
-
-[package.dependencies]
-async-timeout = ">=3.0,<4.0"
-attrs = ">=17.3.0"
-chardet = ">=2.0,<5.0"
-idna-ssl = {version = ">=1.0", markers = "python_version < \"3.7\""}
-multidict = ">=4.5,<7.0"
-typing-extensions = ">=3.6.5"
-yarl = ">=1.0,<2.0"
-
-[package.extras]
-speedups = ["aiodns", "brotlipy", "cchardet"]
-
 [[package]]
 name = "appdirs"
 version = "1.4.4"
@@ -27,12 +7,18 @@ optional = false
 python-versions = "*"
 
 [[package]]
-name = "async-timeout"
-version = "3.0.1"
-description = "Timeout context manager for asyncio programs"
-category = "main"
+name = "asttokens"
+version = "2.0.5"
+description = "Annotate AST trees with source code positions"
+category = "dev"
 optional = false
-python-versions = ">=3.5.3"
+python-versions = "*"
+
+[package.dependencies]
+six = "*"
+
+[package.extras]
+test = ["astroid", "pytest"]
 
 [[package]]
 name = "atomicwrites"
@@ -46,7 +32,7 @@ python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*"
 name = "attrs"
 version = "21.2.0"
 description = "Classes Without Boilerplate"
-category = "main"
+category = "dev"
 optional = false
 python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*"
 
@@ -79,41 +65,17 @@ typing-extensions = ">=3.7.4"
 colorama = ["colorama (>=0.4.3)"]
 d = ["aiohttp (>=3.3.2)", "aiohttp-cors"]
 
-[[package]]
-name = "botocore"
-version = "1.24.4"
-description = "Low-level, data-driven core of boto 3."
-category = "main"
-optional = false
-python-versions = ">= 3.6"
-
-[package.dependencies]
-jmespath = ">=0.7.1,<1.0.0"
-python-dateutil = ">=2.1,<3.0.0"
-urllib3 = ">=1.25.4,<1.27"
-
-[package.extras]
-crt = ["awscrt (==0.12.5)"]
-
 [[package]]
 name = "certifi"
-version = "2021.10.8"
+version = "2022.6.15"
 description = "Python package for providing Mozilla's CA Bundle."
 category = "main"
 optional = false
-python-versions = "*"
-
-[[package]]
-name = "chardet"
-version = "4.0.0"
-description = "Universal encoding detector for Python 2 and 3"
-category = "main"
-optional = false
-python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*"
+python-versions = ">=3.6"
 
 [[package]]
 name = "charset-normalizer"
-version = "2.0.8"
+version = "2.0.12"
 description = "The Real First Universal Charset Detector. Open, modern and actively maintained alternative to Chardet."
 category = "main"
 optional = false
@@ -178,40 +140,61 @@ wrapt = ">=1.10,<2"
 [package.extras]
 dev = ["tox", "bump2version (<1)", "sphinx (<2)", "importlib-metadata (<3)", "importlib-resources (<4)", "configparser (<5)", "sphinxcontrib-websupport (<2)", "zipp (<2)", "PyTest (<5)", "PyTest-Cov (<2.6)", "pytest", "pytest-cov"]
 
+[[package]]
+name = "devtools"
+version = "0.8.0"
+description = "Python's missing debug print command and other development tools."
+category = "dev"
+optional = false
+python-versions = ">=3.6"
+
+[package.dependencies]
+asttokens = ">=2.0.0,<3.0.0"
+executing = ">=0.8.0,<1.0.0"
+
+[package.extras]
+pygments = ["Pygments (>=2.2.0)"]
+
+[[package]]
+name = "executing"
+version = "0.8.3"
+description = "Get the currently executing AST node of a frame, and other information"
+category = "dev"
+optional = false
+python-versions = "*"
+
 [[package]]
 name = "gql"
-version = "3.0.0"
+version = "3.3.0"
 description = "GraphQL client for Python"
 category = "main"
 optional = false
 python-versions = "*"
 
 [package.dependencies]
-aiohttp = {version = ">=3.7.1,<3.9.0", optional = true, markers = "extra == \"all\""}
-botocore = {version = ">=1.21,<2", optional = true, markers = "extra == \"all\""}
 graphql-core = ">=3.2,<3.3"
-requests = {version = ">=2.26,<3", optional = true, markers = "extra == \"all\""}
-requests_toolbelt = {version = ">=0.9.1,<1", optional = true, markers = "extra == \"all\""}
-urllib3 = {version = ">=1.26", optional = true, markers = "extra == \"all\""}
+requests = {version = ">=2.26,<3", optional = true, markers = "extra == \"requests\""}
+requests-toolbelt = {version = ">=0.9.1,<1", optional = true, markers = "extra == \"requests\""}
+urllib3 = {version = ">=1.26", optional = true, markers = "extra == \"requests\""}
 websockets = [
-    {version = ">=9,<10", optional = true, markers = "python_version <= \"3.6\" or python_version <= \"3.6\" and extra == \"all\""},
-    {version = ">=10,<11", optional = true, markers = "python_version > \"3.6\" or python_version > \"3.6\" and extra == \"all\""},
+    {version = ">=9,<10", optional = true, markers = "python_version <= \"3.6\" or python_version <= \"3.6\" and extra == \"websockets\""},
+    {version = ">=10,<11", optional = true, markers = "python_version > \"3.6\" or python_version > \"3.6\" and extra == \"websockets\""},
 ]
 yarl = ">=1.6,<2.0"
 
 [package.extras]
 aiohttp = ["aiohttp (>=3.7.1,<3.9.0)"]
-all = ["aiohttp (>=3.7.1,<3.9.0)", "requests (>=2.26,<3)", "requests_toolbelt (>=0.9.1,<1)", "urllib3 (>=1.26)", "botocore (>=1.21,<2)", "websockets (>=9,<10)", "websockets (>=10,<11)"]
+all = ["aiohttp (>=3.7.1,<3.9.0)", "requests (>=2.26,<3)", "requests-toolbelt (>=0.9.1,<1)", "urllib3 (>=1.26)", "botocore (>=1.21,<2)", "websockets (>=9,<10)", "websockets (>=10,<11)"]
 botocore = ["botocore (>=1.21,<2)"]
-dev = ["aiohttp (>=3.7.1,<3.9.0)", "requests (>=2.26,<3)", "requests_toolbelt (>=0.9.1,<1)", "urllib3 (>=1.26)", "botocore (>=1.21,<2)", "black (==19.10b0)", "check-manifest (>=0.42,<1)", "flake8 (==3.8.1)", "isort (==4.3.21)", "mypy (==0.910)", "sphinx (>=3.0.0,<4)", "sphinx_rtd_theme (>=0.4,<1)", "sphinx-argparse (==0.2.5)", "types-aiofiles", "types-mock", "types-requests", "parse (==1.15.0)", "pytest (==6.2.5)", "pytest-asyncio (==0.16.0)", "pytest-cov (==3.0.0)", "mock (==4.0.2)", "vcrpy (==4.0.2)", "aiofiles", "websockets (>=9,<10)", "websockets (>=10,<11)"]
-requests = ["requests (>=2.26,<3)", "requests_toolbelt (>=0.9.1,<1)", "urllib3 (>=1.26)"]
-test = ["aiohttp (>=3.7.1,<3.9.0)", "requests (>=2.26,<3)", "requests_toolbelt (>=0.9.1,<1)", "urllib3 (>=1.26)", "botocore (>=1.21,<2)", "parse (==1.15.0)", "pytest (==6.2.5)", "pytest-asyncio (==0.16.0)", "pytest-cov (==3.0.0)", "mock (==4.0.2)", "vcrpy (==4.0.2)", "aiofiles", "websockets (>=9,<10)", "websockets (>=10,<11)"]
-test_no_transport = ["parse (==1.15.0)", "pytest (==6.2.5)", "pytest-asyncio (==0.16.0)", "pytest-cov (==3.0.0)", "mock (==4.0.2)", "vcrpy (==4.0.2)", "aiofiles"]
+dev = ["aiohttp (>=3.7.1,<3.9.0)", "requests (>=2.26,<3)", "requests-toolbelt (>=0.9.1,<1)", "urllib3 (>=1.26)", "botocore (>=1.21,<2)", "black (==22.3.0)", "check-manifest (>=0.42,<1)", "flake8 (==3.8.1)", "isort (==4.3.21)", "mypy (==0.910)", "sphinx (>=3.0.0,<4)", "sphinx-rtd-theme (>=0.4,<1)", "sphinx-argparse (==0.2.5)", "types-aiofiles", "types-mock", "types-requests", "parse (==1.15.0)", "pytest (==6.2.5)", "pytest-asyncio (==0.16.0)", "pytest-console-scripts (==1.3.1)", "pytest-cov (==3.0.0)", "mock (==4.0.2)", "vcrpy (==4.0.2)", "aiofiles", "websockets (>=9,<10)", "websockets (>=10,<11)"]
+requests = ["requests (>=2.26,<3)", "requests-toolbelt (>=0.9.1,<1)", "urllib3 (>=1.26)"]
+test = ["aiohttp (>=3.7.1,<3.9.0)", "requests (>=2.26,<3)", "requests-toolbelt (>=0.9.1,<1)", "urllib3 (>=1.26)", "botocore (>=1.21,<2)", "parse (==1.15.0)", "pytest (==6.2.5)", "pytest-asyncio (==0.16.0)", "pytest-console-scripts (==1.3.1)", "pytest-cov (==3.0.0)", "mock (==4.0.2)", "vcrpy (==4.0.2)", "aiofiles", "websockets (>=9,<10)", "websockets (>=10,<11)"]
+test_no_transport = ["parse (==1.15.0)", "pytest (==6.2.5)", "pytest-asyncio (==0.16.0)", "pytest-console-scripts (==1.3.1)", "pytest-cov (==3.0.0)", "mock (==4.0.2)", "vcrpy (==4.0.2)", "aiofiles"]
 websockets = ["websockets (>=9,<10)", "websockets (>=10,<11)"]
 
 [[package]]
 name = "graphql-core"
-version = "3.2.0"
+version = "3.2.1"
 description = "GraphQL implementation for Python, a port of GraphQL.js, the JavaScript reference implementation for GraphQL."
 category = "main"
 optional = false
@@ -225,17 +208,6 @@ category = "main"
 optional = false
 python-versions = ">=3.5"
 
-[[package]]
-name = "idna-ssl"
-version = "1.1.0"
-description = "Patch ssl.match_hostname for Unicode(idna) domains support"
-category = "main"
-optional = false
-python-versions = "*"
-
-[package.dependencies]
-idna = ">=2.0"
-
 [[package]]
 name = "importlib-metadata"
 version = "4.8.2"
@@ -275,14 +247,6 @@ requirements_deprecated_finder = ["pipreqs", "pip-api"]
 colors = ["colorama (>=0.4.3,<0.5.0)"]
 plugins = ["setuptools"]
 
-[[package]]
-name = "jmespath"
-version = "0.10.0"
-description = "JSON Matching Expressions"
-category = "main"
-optional = false
-python-versions = ">=2.6, !=3.0.*, !=3.1.*, !=3.2.*"
-
 [[package]]
 name = "multidict"
 version = "5.2.0"
@@ -416,17 +380,6 @@ python-versions = "*"
 [package.dependencies]
 pytest = "*"
 
-[[package]]
-name = "python-dateutil"
-version = "2.8.2"
-description = "Extensions to the standard Python datetime module"
-category = "main"
-optional = false
-python-versions = "!=3.0.*,!=3.1.*,!=3.2.*,>=2.7"
-
-[package.dependencies]
-six = ">=1.5"
-
 [[package]]
 name = "regex"
 version = "2021.11.10"
@@ -437,7 +390,7 @@ python-versions = "*"
 
 [[package]]
 name = "requests"
-version = "2.26.0"
+version = "2.27.1"
 description = "Python HTTP for Humans."
 category = "main"
 optional = false
@@ -468,7 +421,7 @@ requests = ">=2.0.1,<3.0.0"
 name = "six"
 version = "1.16.0"
 description = "Python 2 and 3 compatibility utilities"
-category = "main"
+category = "dev"
 optional = false
 python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*"
 
@@ -514,14 +467,14 @@ python-versions = ">=3.6"
 
 [[package]]
 name = "urllib3"
-version = "1.26.7"
+version = "1.26.9"
 description = "HTTP library with thread-safe connection pooling, file post, and more."
 category = "main"
 optional = false
 python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*, <4"
 
 [package.extras]
-brotli = ["brotlipy (>=0.6.0)"]
+brotli = ["brotlicffi (>=0.8.0)", "brotli (>=1.0.9)", "brotlipy (>=0.6.0)"]
 secure = ["pyOpenSSL (>=0.14)", "cryptography (>=1.3.4)", "idna (>=2.0.0)", "certifi", "ipaddress"]
 socks = ["PySocks (>=1.5.6,!=1.5.7,<2.0)"]
 
@@ -535,7 +488,7 @@ python-versions = ">=3.6.1"
 
 [[package]]
 name = "websockets"
-version = "10.2"
+version = "10.3"
 description = "An implementation of the WebSocket Protocol (RFC 6455 & 7692)"
 category = "main"
 optional = false
@@ -577,55 +530,16 @@ testing = ["pytest (>=4.6)", "pytest-checkdocs (>=2.4)", "pytest-flake8", "pytes
 [metadata]
 lock-version = "1.1"
 python-versions = "^3.6.5"
-content-hash = "78b3a6fe933735ef4f3c0dca34c08521ab2c11aceb2b7f5572846870d39d46f4"
+content-hash = "460c5e149a49abcde84f74aa13dbf09eba66c7942af8d1cc65580f1e44927d17"
 
 [metadata.files]
-aiohttp = [
-    {file = "aiohttp-3.7.4.post0-cp36-cp36m-macosx_10_14_x86_64.whl", hash = "sha256:3cf75f7cdc2397ed4442594b935a11ed5569961333d49b7539ea741be2cc79d5"},
-    {file = "aiohttp-3.7.4.post0-cp36-cp36m-manylinux1_i686.whl", hash = "sha256:4b302b45040890cea949ad092479e01ba25911a15e648429c7c5aae9650c67a8"},
-    {file = "aiohttp-3.7.4.post0-cp36-cp36m-manylinux2014_aarch64.whl", hash = "sha256:fe60131d21b31fd1a14bd43e6bb88256f69dfc3188b3a89d736d6c71ed43ec95"},
-    {file = "aiohttp-3.7.4.post0-cp36-cp36m-manylinux2014_i686.whl", hash = "sha256:393f389841e8f2dfc86f774ad22f00923fdee66d238af89b70ea314c4aefd290"},
-    {file = "aiohttp-3.7.4.post0-cp36-cp36m-manylinux2014_ppc64le.whl", hash = "sha256:c6e9dcb4cb338d91a73f178d866d051efe7c62a7166653a91e7d9fb18274058f"},
-    {file = "aiohttp-3.7.4.post0-cp36-cp36m-manylinux2014_s390x.whl", hash = "sha256:5df68496d19f849921f05f14f31bd6ef53ad4b00245da3195048c69934521809"},
-    {file = "aiohttp-3.7.4.post0-cp36-cp36m-manylinux2014_x86_64.whl", hash = "sha256:0563c1b3826945eecd62186f3f5c7d31abb7391fedc893b7e2b26303b5a9f3fe"},
-    {file = "aiohttp-3.7.4.post0-cp36-cp36m-win32.whl", hash = "sha256:3d78619672183be860b96ed96f533046ec97ca067fd46ac1f6a09cd9b7484287"},
-    {file = "aiohttp-3.7.4.post0-cp36-cp36m-win_amd64.whl", hash = "sha256:f705e12750171c0ab4ef2a3c76b9a4024a62c4103e3a55dd6f99265b9bc6fcfc"},
-    {file = "aiohttp-3.7.4.post0-cp37-cp37m-macosx_10_14_x86_64.whl", hash = "sha256:230a8f7e24298dea47659251abc0fd8b3c4e38a664c59d4b89cca7f6c09c9e87"},
-    {file = "aiohttp-3.7.4.post0-cp37-cp37m-manylinux1_i686.whl", hash = "sha256:2e19413bf84934d651344783c9f5e22dee452e251cfd220ebadbed2d9931dbf0"},
-    {file = "aiohttp-3.7.4.post0-cp37-cp37m-manylinux2014_aarch64.whl", hash = "sha256:e4b2b334e68b18ac9817d828ba44d8fcb391f6acb398bcc5062b14b2cbeac970"},
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-    {file = "aiohttp-3.7.4.post0-cp37-cp37m-manylinux2014_ppc64le.whl", hash = "sha256:40eced07f07a9e60e825554a31f923e8d3997cfc7fb31dbc1328c70826e04cde"},
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 ]
 wrapt = [
     {file = "wrapt-1.13.3-cp27-cp27m-macosx_10_9_x86_64.whl", hash = "sha256:e05e60ff3b2b0342153be4d1b597bbcfd8330890056b9619f4ad6b8d5c96a81a"},

pyproject.toml

@@ -14,7 +14,7 @@ homepage = "https://speckle.systems/"
 python = "^3.6.5"
 pydantic = "^1.8.2"
 appdirs = "^1.4.4"
-gql = {version = ">=3.0.0b1", extras = ["all"], allow-prereleases = true}
+gql = {extras = ["requests", "websockets"], version = "^3.3.0"}
 ujson = "^4.3.0"
 Deprecated = "^1.2.13"
 
@@ -24,6 +24,7 @@ isort = "^5.7.0"
 pytest = "^6.2.2"
 pytest-ordering = "^0.6"
 pytest-cov = "^3.0.0"
+devtools = "^0.8.0"
 
 
 [tool.black]

specklepy/api/operations.py

@@ -40,13 +40,8 @@ def send(
 
     serializer = BaseObjectSerializer(write_transports=transports)
 
-    for t in transports:
-        t.begin_write()
     obj_hash, _ = serializer.write_json(base=base)
 
-    for t in transports:
-        t.end_write()
-
     return obj_hash
 
 

specklepy/api/resources/object.py

@@ -52,7 +52,9 @@ class Resource(ResourceBase):
         params = {"stream_id": stream_id, "object_id": object_id}
 
         return self.make_request(
-            query=query, params=params, return_type=["stream", "object", "data"]
+            query=query,
+            params=params,
+            return_type=["stream", "object", "data"],
         )
 
     def create(self, stream_id: str, objects: List[Dict]) -> str:

specklepy/serialization/base_object_serializer.py

@@ -1,17 +1,19 @@
+import re
 import ujson
 import hashlib
-import re
+import warnings
 from uuid import uuid4
 from enum import Enum
 from warnings import warn
 from typing import Any, Dict, List, Tuple
 from specklepy.objects.base import Base, DataChunk
 from specklepy.logging.exceptions import (
-    SerializationException,
     SpeckleException,
     SpeckleWarning,
 )
 from specklepy.transports.abstract_transport import AbstractTransport
+
+# import for serialization
 import specklepy.objects.geometry
 import specklepy.objects.other
 
@@ -50,9 +52,16 @@ class BaseObjectSerializer:
         self.read_transport = read_transport
 
     def write_json(self, base: Base):
-        self.__reset_writer()
-        self.detach_lineage = [True]
+        """Serializes a given base object into a json string
+        Arguments:
+            base {Base} -- the base object to be decomposed and serialized
+
+        Returns:
+            (str, str) -- a tuple containing the hash (id) of the base object and the serialized object string
+        """
+
         hash, obj = self.traverse_base(base)
+
         return hash, ujson.dumps(obj)
 
     def traverse_base(self, base: Base) -> Tuple[str, Dict]:
@@ -64,6 +73,21 @@ class BaseObjectSerializer:
         Returns:
             (str, dict) -- a tuple containing the hash (id) of the base object and the constructed serializable dictionary
         """
+        self.__reset_writer()
+
+        if self.write_transports:
+            for wt in self.write_transports:
+                wt.begin_write()
+
+        hash, obj = self._traverse_base(base)
+
+        if self.write_transports:
+            for wt in self.write_transports:
+                wt.end_write()
+
+        return hash, obj
+
+    def _traverse_base(self, base: Base) -> Tuple[str, Dict]:
         if not self.detach_lineage:
             self.detach_lineage = [True]
 
@@ -141,7 +165,7 @@ class BaseObjectSerializer:
                 chunk_refs = []
                 for c in chunks:
                     self.detach_lineage.append(detach)
-                    ref_hash, _ = self.traverse_base(c)
+                    ref_hash, _ = self._traverse_base(c)
                     ref_obj = self.detach_helper(ref_hash=ref_hash)
                     chunk_refs.append(ref_obj)
                 object_builder[prop] = chunk_refs
@@ -200,7 +224,7 @@ class BaseObjectSerializer:
             for o in obj:
                 if isinstance(o, Base):
                     self.detach_lineage.append(detach)
-                    hash, _ = self.traverse_base(o)
+                    hash, _ = self._traverse_base(o)
                     detached_list.append(self.detach_helper(ref_hash=hash))
                 else:
                     detached_list.append(self.traverse_value(o, detach))
@@ -216,7 +240,7 @@ class BaseObjectSerializer:
 
         elif isinstance(obj, Base):
             self.detach_lineage.append(detach)
-            _, base_obj = self.traverse_base(obj)
+            _, base_obj = self._traverse_base(obj)
             return base_obj
 
         else:
@@ -255,7 +279,7 @@ class BaseObjectSerializer:
 
     def __reset_writer(self) -> None:
         """Reinitializes the lineage, and other variables that get used during the json writing process"""
-        self.detach_lineage = []
+        self.detach_lineage = [True]
         self.lineage = []
         self.family_tree = {}
         self.closure_table = {}
@@ -321,12 +345,15 @@ class BaseObjectSerializer:
             elif "referencedId" in value:
                 ref_hash = value["referencedId"]
                 ref_obj_str = self.read_transport.get_object(id=ref_hash)
-                if not ref_obj_str:
-                    raise SpeckleException(
-                        f"Could not find the referenced child object of id `{ref_hash}` in the given read transport: {self.read_transport.name}"
+                if ref_obj_str:
+                    ref_obj = safe_json_loads(ref_obj_str, ref_hash)
+                    base.__setattr__(prop, self.recompose_base(obj=ref_obj))
+                else:
+                    warnings.warn(
+                        f"Could not find the referenced child object of id `{ref_hash}` in the given read transport: {self.read_transport.name}",
+                        SpeckleWarning,
                     )
-                ref_obj = safe_json_loads(ref_obj_str, ref_hash)
-                base.__setattr__(prop, self.recompose_base(obj=ref_obj))
+                    base.__setattr__(prop, self.handle_value(value))
 
             # 3. handle all other cases (base objects, lists, and dicts)
             else:
@@ -380,8 +407,10 @@ class BaseObjectSerializer:
         ref_hash = obj["referencedId"]
         ref_obj_str = self.read_transport.get_object(id=ref_hash)
         if not ref_obj_str:
-            raise SpeckleException(
-                f"Could not find the referenced child object of id `{ref_hash}` in the given read transport: {self.read_transport.name}"
+            warnings.warn(
+                f"Could not find the referenced child object of id `{ref_hash}` in the given read transport: {self.read_transport.name}",
+                SpeckleWarning,
             )
+            return obj
 
         return safe_json_loads(ref_obj_str, ref_hash)

specklepy/transports/sqlite.py

@@ -3,7 +3,7 @@ import sys
 import time
 import sched
 import sqlite3
-from typing import Any, List, Dict
+from typing import Any, List, Dict, Tuple
 from appdirs import user_data_dir
 from contextlib import closing
 from specklepy.transports.abstract_transport import AbstractTransport
@@ -14,25 +14,29 @@ class SQLiteTransport(AbstractTransport):
     _name = "SQLite"
     _base_path: str = None
     _root_path: str = None
-    _is_writing: bool = False
-    _scheduler = sched.scheduler(time.time, time.sleep)
-    _polling_interval = 0.5  # seconds
     __connection: sqlite3.Connection = None
     app_name: str = ""
     scope: str = ""
     saved_obj_count: int = 0
+    max_size: int = None
+    _current_batch: List[Tuple[str, str]] = None
+    _current_batch_size: int = None
 
     def __init__(
         self,
         base_path: str = None,
         app_name: str = None,
         scope: str = None,
+        max_batch_size_mb: float = 10.0,
         **data: Any,
     ) -> None:
         super().__init__(**data)
         self.app_name = app_name or "Speckle"
         self.scope = scope or "Objects"
         self._base_path = base_path or self.get_base_path(self.app_name)
+        self.max_size = int(max_batch_size_mb * 1000 * 1000)
+        self._current_batch = []
+        self._current_batch_size = 0
 
         try:
             os.makedirs(self._base_path, exist_ok=True)
@@ -50,12 +54,6 @@ class SQLiteTransport(AbstractTransport):
     def __repr__(self) -> str:
         return f"SQLiteTransport(app: '{self.app_name}', scope: '{self.scope}')"
 
-    # def __write_timer_elapsed(self):
-    #     print("WRITE TIMER ELAPSED")
-    #     proc = Process(target=_run_queue, args=(self.__queue, self._root_path))
-    #     proc.start()
-    #     proc.join()
-
     @staticmethod
     def get_base_path(app_name):
         # from appdirs https://github.com/ActiveState/appdirs/blob/master/appdirs.py
@@ -74,36 +72,6 @@ class SQLiteTransport(AbstractTransport):
         path = os.path.expanduser("~/.config/")
         return os.path.join(path, app_name)
 
-    # def __consume_queue(self):
-    #     if self._is_writing or self.__queue.empty():
-    #         return
-    #     print("CONSUME QUEUE")
-    #     self._is_writing = True
-    #     while not self.__queue.empty():
-    #         data = self.__queue.get()
-    #         self.save_object(data[0], data[1])
-    #     self._is_writing = False
-
-    #     self._scheduler.enter(
-    #         delay=self._polling_interval, priority=1, action=self.__consume_queue
-    #     )
-    #     self._scheduler.run(blocking=True)
-
-    # def save_object(self, id: str, serialized_object: str) -> None:
-    #     """Adds an object to the queue and schedules it to be saved.
-
-    #     Arguments:
-    #         id {str} -- the object id
-    #         serialized_object {str} -- the full string representation of the object
-    #     """
-    #     print("SAVE OBJECT")
-    #     self.__queue.put((id, serialized_object))
-
-    #     self._scheduler.enter(
-    #         delay=self._polling_interval, priority=1, action=self.__consume_queue
-    #     )
-    #     self._scheduler.run(blocking=True)
-
     def save_object_from_transport(
         self, id: str, source_transport: AbstractTransport
     ) -> None:
@@ -117,23 +85,41 @@ class SQLiteTransport(AbstractTransport):
         self.save_object(id, serialized_object)
 
     def save_object(self, id: str, serialized_object: str) -> None:
-        """Directly saves an object into the database.
+        """
+        Adds an object to the current batch to be written to the db. If the current batch is full,
+        the batch is written to the db and the current batch is reset.
 
         Arguments:
             id {str} -- the object id
             serialized_object {str} -- the full string representation of the object
         """
+        obj_size = len(serialized_object)
+        if (
+            not self._current_batch
+            or self._current_batch_size + obj_size < self.max_size
+        ):
+            self._current_batch.append((id, serialized_object))
+            self._current_batch_size += obj_size
+            return
+
+        self.save_current_batch()
+        self._current_batch = [(id, serialized_object)]
+        self._current_batch_size = obj_size
+
+    def save_current_batch(self) -> None:
+        """Save the current batch of objects to the local db"""
         self.__check_connection()
         try:
             with closing(self.__connection.cursor()) as c:
-                c.execute(
+                c.executemany(
                     "INSERT OR IGNORE INTO objects(hash, content) VALUES(?,?)",
-                    (id, serialized_object),
+                    self._current_batch,
                 )
                 self.__connection.commit()
         except Exception as ex:
             raise SpeckleException(
-                f"Could not save the object to the local db. Inner exception: {ex}", ex
+                f"Could not save the batch of objects to the local db. Inner exception: {ex}",
+                ex,
             )
 
     def get_object(self, id: str) -> str or None:
@@ -156,10 +142,14 @@ class SQLiteTransport(AbstractTransport):
         return ret
 
     def begin_write(self):
+        self._object_cache = []
         self.saved_obj_count = 0
 
     def end_write(self):
-        pass
+        if self._current_batch:
+            self.save_current_batch()
+        self._current_batch = []
+        self._current_batch_size = 0
 
     def copy_object_and_children(
         self, id: str, target_transport: AbstractTransport
@@ -199,19 +189,3 @@ class SQLiteTransport(AbstractTransport):
 
     def __del__(self):
         self.__connection.close()
-
-
-# def _run_queue(queue: Queue, root_path: str):
-#     if queue.empty():
-#         return
-#     print("RUN QUEUE")
-#     conn = sqlite3.connect(root_path)
-#     while not queue.empty():
-#         data = queue.get()
-#         with closing(conn.cursor()) as c:
-#             c.execute(
-#                 "INSERT OR IGNORE INTO objects(hash, content) VALUES(?,?)",
-#                 (data[0], data[1]),
-#             )
-#             conn.commit()
-#     conn.close()

tests/conftest.py

@@ -61,7 +61,7 @@ def second_user_dict(host):
 @pytest.fixture(scope="session")
 def client(host, user_dict):
     client = SpeckleClient(host=host, use_ssl=False)
-    client.authenticate(user_dict["token"])
+    client.authenticate_with_token(user_dict["token"])
     return client