* Revert "Revert structured logging 2 (#1240)"
This reverts commit 78ecaeffcb.
* Logging should not be bundled into core shared directory
* making sure observability stuff isnt bundled into frontend
Co-authored-by: Kristaps Fabians Geikins <fabis94@live.com>
* Revert "'@' shortcut must come after it is configured in bootstrap (#1239)"
This reverts commit 967329473f.
* Revert "Structured logging (attempt 2) (#1234)"
This reverts commit 444d2ca7dd.
* Revert "Revert "feat(structured logging): implements structured logging for backend (#1217)" (#1227)"
This reverts commit 63e6581162.
* Use pino-http instead of express pino logger
* Use correct reference to knex and do not instantiate HttpLogger prematurely
* Adds missing dependency for pino to webhook-service
* Do not instantiate middleware when passed to express
* Refactor to move logging into shared
* Copy shared packages into dockerfiles
* Build shared workspace in docker build-stage for fileimport & webhook
* each log line is a json object
* structured logging allows logs to be ingested by machines and the logs to be indexed and queried addresses #1105
* structured logging allows arbitrary properties to be appended to each log line, and ingestion of logs to remain robust
* Structured logging provided by `pino` library
* Add `express-pino-logger` dependency
* Remove `debug`, `morgan`, and `morgan-debug` and replace with structured logging
* `console.log` & `console.error` replaced with structured logging in backend
* Remove `DEBUG` environment variable and replace with `LOG_LEVEL`
- Note that there is a test which reads from a logged line on `stdout`. This is not robust, it would be better to use the childProcess.pid to look up the port number.
* Log errors at points we explicitly send error to Sentry
* Amend indentation of a couple of log messages to align indentation with others
* Allow save object to S3 in different region
* feat(helm & docker-compose): adds S3_REGION to helm chart & docker-compose
Explicitly adding the environment variable to deployment configuration files provides system operators with documentation of its existence.
Set to empty by default, which will result in the default value being used.
Co-authored-by: Iain Sproat <68657+iainsproat@users.noreply.github.com>
* feat(server): add server authz pipeline rework first sketch
* feat(server authz): add new server authz middleware poc implementation
* test(server authz): add unittests for the new server authz workflow
* feat(wip rework of fileuploads vs blob storage): add basim impl of separate blob storage service
* feat(fileimport service): refactored file import service to utilize the new asssetstorage service
* refactor(server errors): refactor server errors to use the shared module definitions
Now all the errors inherit from BaseError
* refactor(fileimport service): cleanup after refactor
* feat(frontend fileimports): use the new blob storage for downloading the original file
* refactor(server fileimports): clean up the remnants of S3 storage from file imports
* refactor(server authz): centralize generic authz pipeline configs
* refactor(server blob storage): refactor / rename everything to use the `blob-storage` name
* ci(circleci): add s3 objectstorage environment variables
* ci(circleci): fix missing env variables
* ci(circleci): add minio test container
* ci(circleci): fix minio app startup
* ci(circleci): enable circleci remote docker
* ci(circleci): fix minio startup
* ci(cirleci): detach and wait properly for minio to start
* ci(circleci): revert to additional minio img config, it only fails when the container is stopped ?!
* ci(circleci): disable file uploads
* fix(fileimports): update with blob storage refactor leftovers
* feat(server blob storage): add blob storage graphql api
* refactor(server errors): merge new errors to shared module
* fix(server comments rte): fix import for RTE error
* chore(fileimports): remove node-fetch from dependency
* chore(server): remove body parser dependency
* fix(server blob storage): fix gql api
* fix(frontend): fix fileupload item not loading the new upload status, cause of premature event fire
* feat(server blob storage): fix file size limit and allow for public streams
* Update packages/server/modules/blobstorage/graph/schemas/blobstorage.graphql
Co-authored-by: Kristaps Fabians Geikins <fabis94@live.com>
* chore(blobstorage): fix PR review issues
* fix(server): fix import bugs
* test(server): blob storage first test
* test(server blob services): add tests for blob storage services
* test(server blob storage): add service and rest api tests
* test(server blob storage): add server blob storage graphql api tests
* feat(server blob storage): store and make available blob fileHash attribute
* feat(server authz): add fatal failure option to server authz pipeline
Co-authored-by: Kristaps Fabians Geikins <fabis94@live.com>
* feat(server): add server authz pipeline rework first sketch
* feat(server authz): add new server authz middleware poc implementation
* test(server authz): add unittests for the new server authz workflow
* feat(wip rework of fileuploads vs blob storage): add basim impl of separate blob storage service
* feat(fileimport service): refactored file import service to utilize the new asssetstorage service
* refactor(server errors): refactor server errors to use the shared module definitions
Now all the errors inherit from BaseError
* refactor(fileimport service): cleanup after refactor
* feat(frontend fileimports): use the new blob storage for downloading the original file
* refactor(server fileimports): clean up the remnants of S3 storage from file imports
* refactor(server authz): centralize generic authz pipeline configs
* refactor(server blob storage): refactor / rename everything to use the `blob-storage` name
* ci(circleci): add s3 objectstorage environment variables
* ci(circleci): fix missing env variables
* ci(circleci): add minio test container
* ci(circleci): fix minio app startup
* ci(circleci): enable circleci remote docker
* ci(circleci): fix minio startup
* ci(cirleci): detach and wait properly for minio to start
* ci(circleci): revert to additional minio img config, it only fails when the container is stopped ?!
* ci(circleci): disable file uploads
* fix(fileimports): update with blob storage refactor leftovers
* feat(server blob storage): add blob storage graphql api
* refactor(server errors): merge new errors to shared module
* fix(server comments rte): fix import for RTE error
* chore(fileimports): remove node-fetch from dependency
* chore(server): remove body parser dependency
* fix(server blob storage): fix gql api
* fix(frontend): fix fileupload item not loading the new upload status, cause of premature event fire
* feat(server blob storage): fix file size limit and allow for public streams
* Update packages/server/modules/blobstorage/graph/schemas/blobstorage.graphql
Co-authored-by: Kristaps Fabians Geikins <fabis94@live.com>
* chore(blobstorage): fix PR review issues
* fix(server): fix import bugs
Co-authored-by: Kristaps Fabians Geikins <fabis94@live.com>
Iain Sproat