Files
pygeoapi/.github/workflows/main.yml
T
Bernhard Mallinger 35bdcb6f02 Proposal to split api.py into different files (#1405)
* Move api to subdirectory

* Move processes api to own file

* Adapt processes view methods

* Move openapi definition to processes api

* Use processes api in flask

* Linter

* Fix import issues

* Allow calling refactored views from starlette

* Allow calling refactored views from django

* Linter

* Move edr api to own file

* Adapt edr api to new style

* Fix typo in django views

* Move maps api to own file

* Adapt maps api to new style

* Move edr openapi to edr api file

* Move maps openapi to maps api file

* Move stac views to own file

* Refactor stac views to new file

* Move stac openapi to stac api file

* Move tiles api to own file

* Adapt tiles api to new style

* Also move tilematrixset to tiles api

* Adapt tilesetmatrix views to new style

NOTE: I had to remove one tilematrixsets test because
it tested that an invalid format would produce an error.
This now happens by default for all views, but the actual
code is outside of the endpoint function.

* update features, records, coverages

* update release version

* switch back to dev

* backport of #1313

* backport of #1313 fix

* backport of #1585

* Flask: sanitize OGC schema pathing (#1593)

* update release version

* switch back to dev

* backport of #1596

* Port test_gzip_csv test

Note that apply_gzip is now called by the web framework adapters,
so to test it in general, we have to call it in the test manually

* Add empty conformance class list to stac api

* Fix queryables call in starlette

* fix ref

* Unify request validity checking

The default case is handled by the web framework adapters. If custom
format handling is required, the check in the adapter must be skipped.

* Fix imports in django views

* backport #1598

* Remove test about format handling in endpoint

This is now handled outside of the endpoint function

* add docstring to base process manager (#1603)

* backport of #1601

* Port api ogr tests to new style

* Move processes tests to own file

* Run api tests from new dir in CI

* Move edr tests to own file

* Move maps tests to own file

* Move tiles tests to own file

* Actually hide hidden layers in openapi

* 1600 allow providing default value in config (#1604)

* move coverages tests to own file

* move itemtypes to own file, move core into init test

* fix OpenAPI output

* update tests

* add missing descriptions to OpenAPI admin responses

* update tests

* fix tests autodiscovery

* remove unused logging in tests

* address PR comments

* test with xarray 2024.2.0

* remove unneeded file

* safeguard xarray error

* unpin xarray

* fix OpenAPI generation

* fix schema endpoint in Flask and Starlette

* Safely serialize configuration JSON (#1605)

* Safely serialize configuration JSON

Co-Authored-By: Tom Kralidis <tomkralidis@gmail.com>

* Revert "Safely serialize configuration JSON"

This reverts commit 36feb067ee6f87e61955852dc48994f075806370.

* Add test for datetime with Admin API

* Safely serialize configuration JSON

---------

Co-authored-by: Tom Kralidis <tomkralidis@gmail.com>

* backport #1611

* Also fix schema endpoint for django

Fix is analogous to e72d4ba3a5ba3b8621ca839e7814429beeeb8f01

* address additional PR comments

---------

Co-authored-by: Tom Kralidis <tomkralidis@gmail.com>
Co-authored-by: Angelos Tzotsos <gcpp.kalxas@gmail.com>
Co-authored-by: Ricardo Garcia Silva <ricardo.garcia.silva@gmail.com>
Co-authored-by: Benjamin Webb <40066515+webb-ben@users.noreply.github.com>
2024-04-05 06:06:25 -04:00

188 lines
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YAML

name: Build
on:
push:
paths-ignore:
- '**.md'
pull_request:
branches:
- master
paths-ignore:
- '!**.md'
release:
types:
- released
jobs:
main:
runs-on: ubuntu-22.04
strategy:
matrix:
include:
- python-version: '3.10'
env:
PYGEOAPI_CONFIG: "$(pwd)/pygeoapi-config.yml"
steps:
- name: Clear up GitHub runner diskspace
run: |
echo "Space before"
df -h /
sudo rm -rf /usr/local/lib/android
sudo rm -rf /usr/share/dotnet
echo "Space after"
df -h /
- name: Chown user
run: |
sudo chown -R $USER:$USER $GITHUB_WORKSPACE
- uses: actions/checkout@v2
- uses: actions/setup-python@v2
name: Setup Python ${{ matrix.python-version }}
with:
python-version: ${{ matrix.python-version }}
- name: Configure sysctl limits
run: |
sudo swapoff -a
sudo sysctl -w vm.swappiness=1
sudo sysctl -w fs.file-max=262144
sudo sysctl -w vm.max_map_count=262144
- name: Install and run PostgreSQL/PostGIS 📦
uses: huaxk/postgis-action@v1
with:
postgresql password: ${{ secrets.DatabasePassword || 'postgres' }}
postgresql db: 'test'
- name: Install and run Elasticsearch 📦
uses: getong/elasticsearch-action@v1.2
with:
elasticsearch version: '8.3.1'
host port: 9200
container port: 9200
host node port: 9300
node port: 9300
discovery type: 'single-node'
- name: Install and run MongoDB
uses: supercharge/mongodb-github-action@1.5.0
with:
mongodb-version: 4.4
- name: Install and run SensorThingsAPI
uses: cgs-earth/sensorthings-action@v0.0.2
- name: Install sqlite and gpkg dependencies
uses: awalsh128/cache-apt-pkgs-action@latest
with:
packages: libsqlite3-mod-spatialite
version: 4.3.0a-6build1
- name: Use ubuntuGIS unstable ppa
run: sudo add-apt-repository ppa:ubuntugis/ubuntugis-unstable && sudo apt update
shell: bash
- name: Install GDAL with Python bindings
uses: awalsh128/cache-apt-pkgs-action@latest
with:
packages: gdal-bin libgdal-dev
version: 3.8.4
- name: Install and run Oracle
run: |
docker run -d --name oracledb -e ORACLE_PWD=oracle -v ${{ github.workspace }}/tests/data/oracle/init-db:/opt/oracle/scripts/startup -p 1521:1521 container-registry.oracle.com/database/express:21.3.0-xe
- name: Install requirements 📦
run: |
pip3 install -r requirements.txt
pip3 install -r requirements-admin.txt
pip3 install -r requirements-starlette.txt
pip3 install -r requirements-dev.txt
pip3 install -r requirements-provider.txt
pip3 install -r requirements-django.txt
pip3 install -r docs/requirements.txt
python3 setup.py install
pip3 install --upgrade numpy elasticsearch
pip3 install --upgrade numpy "sqlalchemy<2"
pip3 install --global-option=build_ext --global-option="-I/usr/include/gdal" GDAL==`gdal-config --version`
#pip3 install --upgrade rasterio==1.1.8
- name: setup test data ⚙️
run: |
python3 tests/load_es_data.py tests/data/ne_110m_populated_places_simple.geojson geonameid
python3 tests/load_es_data.py tests/cite/canada-hydat-daily-mean-02HC003.geojson IDENTIFIER
python3 tests/load_mongo_data.py tests/data/ne_110m_populated_places_simple.geojson
gunzip < tests/data/hotosm_bdi_waterways.sql.gz | psql postgresql://postgres:${{ secrets.DatabasePassword || 'postgres' }}@localhost:5432/test
psql postgresql://postgres:${{ secrets.DatabasePassword || 'postgres' }}@localhost:5432/test -f tests/data/dummy_data.sql
docker ps
python3 tests/load_oracle_data.py
- name: run unit tests ⚙️
env:
POSTGRESQL_PASSWORD: ${{ secrets.DatabasePassword || 'postgres' }}
run: |
pytest tests/api
pytest tests/test_api_ogr_provider.py
pytest tests/test_config.py
pytest tests/test_csv__formatter.py
pytest tests/test_csv__provider.py
pytest tests/test_django.py
pytest tests/test_elasticsearch__provider.py
pytest tests/test_esri_provider.py
pytest tests/test_filesystem_provider.py
pytest tests/test_geojson_provider.py
pytest tests/test_mongo_provider.py
pytest tests/test_ogr_csv_provider.py
pytest tests/test_ogr_esrijson_provider.py
pytest tests/test_ogr_gpkg_provider.py
pytest tests/test_ogr_shapefile_provider.py
pytest tests/test_ogr_sqlite_provider.py
pytest tests/test_ogr_wfs_provider.py
# pytest tests/test_ogr_wfs_provider_live.py # NOTE: these are skipped in the file but listed here for completeness
pytest tests/test_openapi.py
pytest tests/test_oracle_provider.py
pytest tests/test_postgresql_provider.py
pytest tests/test_rasterio_provider.py
pytest tests/test_sensorthings_provider.py
pytest tests/test_socrata_provider.py
pytest tests/test_sqlite_geopackage_provider.py
pytest tests/test_tinydb_catalogue_provider.py
pytest tests/test_tinydb_manager_for_parallel_requests.py
pytest tests/test_util.py
pytest tests/test_xarray_netcdf_provider.py
pytest tests/test_xarray_zarr_provider.py
- name: build docs 🏗️
run: cd docs && make html
- name: failed tests 🚩
if: ${{ failure() }}
run: |
pip3 list -v
admin:
runs-on: ubuntu-22.04
strategy:
matrix:
include:
- python-version: '3.10'
env:
PYGEOAPI_CONFIG: "tests/pygeoapi-test-config-admin.yml"
PYGEOAPI_OPENAPI: "tests/pygeoapi-test-openapi-admin.yml"
steps:
- uses: actions/checkout@v2
- uses: actions/setup-python@v2
name: Setup Python ${{ matrix.python-version }}
with:
python-version: ${{ matrix.python-version }}
- uses: awalsh128/cache-apt-pkgs-action@latest
with:
packages: gunicorn python3-gevent
version: 1.0
- name: Install requirements 📦
run: |
pip3 install -r requirements.txt
pip3 install -r requirements-dev.txt
pip3 install -r requirements-admin.txt
python3 setup.py install
- name: Run pygeoapi with admin API ⚙️
run: |
pygeoapi openapi generate ${PYGEOAPI_CONFIG} --output-file ${PYGEOAPI_OPENAPI}
gunicorn --bind 0.0.0.0:5000 \
--reload \
--reload-extra-file ${PYGEOAPI_CONFIG} \
pygeoapi.flask_app:APP &
- name: run integration tests ⚙️
run: |
pytest tests/test_admin_api.py
- name: failed tests 🚩
if: ${{ failure() }}
run: |
pip3 list -v