32cbe3e925
* read from s3 bucket * fix formatting for build workflow * add s3fs to provider requirements * storage options for fsspec * Revert "storage options for fsspec" This reverts commit dcfaceedd78d0f0e0dc3e38610958671c27b06a6. * Revert "storage options for fsspec" This reverts commit dcfaceedd78d0f0e0dc3e38610958671c27b06a6. * delete extraneous code for cloud storage read * update documentation * add ci testing * update test suite config file * update number of collections * update test query for s3 * ci testing updates * read from s3 bucket * fix formatting for build workflow * add s3fs to provider requirements * storage options for fsspec * Revert "storage options for fsspec" This reverts commit dcfaceedd78d0f0e0dc3e38610958671c27b06a6. * Revert "storage options for fsspec" This reverts commit dcfaceedd78d0f0e0dc3e38610958671c27b06a6. * delete extraneous code for cloud storage read * update documentation * add ci testing * update test suite config file * update number of collections * update test query for s3 * ci testing updates * documentation updates * config updates * flake8 * modify sfs3 version installing requirements threw an error when specifying 2023.6.0 (only identifies up through 2023.1.0). Had added the sfs3 requirement to deal with issues thrown when the 2023.9.0 release came out. * updated coverages documentation
319 lines
11 KiB
Python
319 lines
11 KiB
Python
# =================================================================
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#
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# Authors: Tom Kralidis <tomkralidis@gmail.com>
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#
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# Copyright (c) 2021 Tom Kralidis
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#
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# Permission is hereby granted, free of charge, to any person
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# obtaining a copy of this software and associated documentation
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# files (the "Software"), to deal in the Software without
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# restriction, including without limitation the rights to use,
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# copy, modify, merge, publish, distribute, sublicense, and/or sell
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# copies of the Software, and to permit persons to whom the
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# Software is furnished to do so, subject to the following
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# conditions:
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#
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# The above copyright notice and this permission notice shall be
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# included in all copies or substantial portions of the Software.
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#
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# THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND,
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# EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES
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# OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND
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# NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT
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# HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY,
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# WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING
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# FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR
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# OTHER DEALINGS IN THE SOFTWARE.
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#
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# =================================================================
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from datetime import datetime, date, time
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from decimal import Decimal
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from copy import deepcopy
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import pytest
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from pyproj.exceptions import CRSError
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from shapely.geometry import Point
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from pygeoapi import util
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from pygeoapi.api import __version__
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from pygeoapi.provider.base import ProviderTypeError
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from .util import get_test_file_path
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@pytest.fixture()
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def config():
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with open(get_test_file_path('pygeoapi-test-config.yml')) as fh:
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return util.yaml_load(fh)
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@pytest.fixture()
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def config_with_rules() -> dict:
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""" Returns a pygeoapi configuration with default API rules. """
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with open(get_test_file_path('pygeoapi-test-config-apirules.yml')) as fh:
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return util.yaml_load(fh)
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def test_get_typed_value():
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value = util.get_typed_value('2')
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assert isinstance(value, int)
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value = util.get_typed_value('1.2')
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assert isinstance(value, float)
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value = util.get_typed_value('1.c2')
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assert isinstance(value, str)
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def test_yaml_load(config):
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assert isinstance(config, dict)
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with pytest.raises(FileNotFoundError):
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with open(get_test_file_path('404.yml')) as fh:
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util.yaml_load(fh)
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def test_str2bool():
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assert not util.str2bool(False)
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assert not util.str2bool('0')
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assert not util.str2bool('no')
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assert util.str2bool('yes')
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assert util.str2bool('1')
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assert util.str2bool(True)
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assert util.str2bool('true')
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assert util.str2bool('True')
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assert util.str2bool('TRUE')
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assert util.str2bool('tRuE')
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assert util.str2bool('on')
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assert util.str2bool('On')
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assert not util.str2bool('off')
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def test_json_serial():
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d = datetime(1972, 10, 30)
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assert util.json_serial(d) == '1972-10-30T00:00:00'
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d = date(2010, 7, 31)
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assert util.json_serial(d) == '2010-07-31'
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d = time(11)
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assert util.json_serial(d) == '11:00:00'
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d = Decimal(1.0)
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assert util.json_serial(d) == 1.0
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with pytest.raises(TypeError):
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util.json_serial('foo')
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def test_mimetype():
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assert util.get_mimetype('file.xml') == 'application/xml'
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assert util.get_mimetype('file.yml') == 'text/plain'
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assert util.get_mimetype('file.yaml') == 'text/plain'
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def test_get_breadcrumbs():
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path = '/dataset/model-run/forecast-hour/variable.grib2'
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breadcrumbs = util.get_breadcrumbs(path)
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assert len(breadcrumbs) == 5
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assert breadcrumbs[3]['href'] == 'dataset/model-run/forecast-hour'
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def test_path_basename():
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assert util.get_path_basename('/path/to/file.txt') == 'file.txt'
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assert util.get_path_basename('/path/to/dir') == 'dir'
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def test_filter_dict_by_key_value(config):
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collections = util.filter_dict_by_key_value(config['resources'],
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'type', 'collection')
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assert len(collections) == 9
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notfound = util.filter_dict_by_key_value(config['resources'],
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'type', 'foo')
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assert len(notfound) == 0
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def test_get_provider_by_type(config):
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p = util.get_provider_by_type(config['resources']['obs']['providers'],
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'feature')
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assert isinstance(p, dict)
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assert p['type'] == 'feature'
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assert p['name'] == 'CSV'
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with pytest.raises(ProviderTypeError):
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p = util.get_provider_by_type(config['resources']['obs']['providers'],
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'something-else')
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def test_get_provider_default(config):
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pd = util.get_provider_default(config['resources']['obs']['providers'])
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assert pd['type'] == 'feature'
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assert pd['name'] == 'CSV'
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pd = util.get_provider_default(config['resources']['obs']['providers'])
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def test_read_data():
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data = util.read_data(get_test_file_path('pygeoapi-test-config.yml'))
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assert isinstance(data, bytes)
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def test_url_join():
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f = util.url_join
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assert f('http://localhost:5000') == 'http://localhost:5000'
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assert f('http://localhost:5000/') == 'http://localhost:5000'
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assert f('http://localhost:5000', '') == 'http://localhost:5000'
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assert f('http://localhost:5000/', '') == 'http://localhost:5000'
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assert f('http://localhost:5000/', '/') == 'http://localhost:5000'
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assert f('http://localhost:5000/api', '/') == 'http://localhost:5000/api'
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assert f('http://localhost:5000/api', '/v0') == 'http://localhost:5000/api/v0' # noqa
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assert f('http://localhost:5000/api', '/v0/') == 'http://localhost:5000/api/v0' # noqa
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assert f('http://localhost:5000', 'api', 'v0') == 'http://localhost:5000/api/v0' # noqa
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def test_get_base_url(config, config_with_rules):
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assert util.get_base_url(config) == 'http://localhost:5000'
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assert util.get_base_url(config_with_rules) == 'http://localhost:5000/api/v0' # noqa
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def test_get_api_rules(config, config_with_rules):
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# Test unset/default rules
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rules = util.get_api_rules(config)
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assert not rules.strict_slashes
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assert not rules.url_prefix
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assert rules.api_version == __version__
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assert rules.version_header == ''
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assert rules.get_url_prefix() == ''
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assert rules.response_headers == {}
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# Test configured rules
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rules = util.get_api_rules(config_with_rules)
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assert rules.strict_slashes
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assert rules.url_prefix
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assert rules.api_version == __version__
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assert rules.version_header == 'X-API-Version'
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assert rules.response_headers == {'X-API-Version': __version__}
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# Test specific version override
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config_changed = deepcopy(config_with_rules)
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config_changed['server']['api_rules']['api_version'] = '1.2.3'
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rules = util.get_api_rules(config_changed)
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assert rules.api_version == '1.2.3'
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assert rules.get_url_prefix() == 'v1'
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assert rules.get_url_prefix('flask') == '/v1'
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assert rules.get_url_prefix('starlette') == '/v1'
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assert rules.get_url_prefix('django') == r'^v1/'
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# Test prefix without version
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config_changed = deepcopy(config_with_rules)
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config_changed['server']['api_rules']['url_prefix'] = 'test'
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rules = util.get_api_rules(config_changed)
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assert rules.get_url_prefix() == 'test'
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assert rules.get_url_prefix('flask') == '/test'
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assert rules.get_url_prefix('starlette') == '/test'
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assert rules.get_url_prefix('django') == r'^test/'
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def test_get_transform_from_crs():
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crs_in = util.get_crs_from_uri(
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'http://www.opengis.net/def/crs/EPSG/0/4258'
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)
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crs_out = util.get_crs_from_uri(
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'http://www.opengis.net/def/crs/EPSG/0/25833'
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)
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transform_func = util.get_transform_from_crs(crs_in, crs_out)
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p_in = Point((67.278972, 14.394493))
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p_out = Point((473901.6105, 7462606.8762))
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assert p_out.equals_exact(transform_func(p_in), 1e-3)
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def test_get_supported_crs_list():
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DEFAULT_CRS_LIST = [
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'http://www.opengis.net/def/crs/OGC/1.3/CRS84',
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'http://www.opengis.net/def/crs/OGC/1.3/CRS84h'
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]
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DUTCH_CRS = 'http://www.opengis.net/def/crs/EPSG/0/28992'
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# Make various combinations of configs
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CONFIGS = \
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[
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dict(),
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{'crs': ['http://www.opengis.net/def/crs/OGC/1.3/CRS84']},
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{'crs': ['http://www.opengis.net/def/crs/OGC/1.3/CRS84h']},
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{'crs': ['http://www.opengis.net/def/crs/EPSG/0/4326',
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'http://www.opengis.net/def/crs/OGC/1.3/CRS84']},
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{'crs': ['http://www.opengis.net/def/crs/EPSG/0/4326',
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DUTCH_CRS]},
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]
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# Apply all configs to util function
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for config in CONFIGS:
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crs_list = util.get_supported_crs_list(config, DEFAULT_CRS_LIST)
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# Whatever config: a default should be present
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contains_default = False
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for crs in crs_list:
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if crs in DEFAULT_CRS_LIST:
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contains_default = True
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assert contains_default
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# Extra CRSs supplied should also be present
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if DUTCH_CRS in config:
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assert DUTCH_CRS in crs_list
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def test_get_crs_from_uri():
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with pytest.raises(CRSError):
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util.get_crs_from_uri('http://www.opengis.net/not/a/valid/crs/uri')
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with pytest.raises(CRSError):
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util.get_crs_from_uri('http://www.opengis.net/def/crs/EPSG/0/0')
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CRS_DICT = {
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'http://www.opengis.net/def/crs/OGC/1.3/CRS84': 'OGC:CRS84',
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'http://www.opengis.net/def/crs/EPSG/0/4326': 'EPSG:4326',
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'http://www.opengis.net/def/crs/EPSG/0/28992': 'EPSG:28992'
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}
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for key in CRS_DICT:
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crs_obj = util.get_crs_from_uri(key)
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assert crs_obj.srs == CRS_DICT[key]
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def test_transform_bbox():
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# Use rounded values as fractions may differ
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result = [59742, 446645, 129005, 557074]
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bbox = [4, 52, 5, 53]
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from_crs = 'http://www.opengis.net/def/crs/OGC/1.3/CRS84'
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to_crs = 'http://www.opengis.net/def/crs/EPSG/0/28992'
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bbox_trans = util.transform_bbox(bbox, from_crs, to_crs)
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for n in range(4):
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assert round(bbox_trans[n]) == result[n]
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bbox = [52, 4, 53, 5]
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from_crs = 'http://www.opengis.net/def/crs/EPSG/0/4326'
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bbox_trans = util.transform_bbox(bbox, from_crs, to_crs)
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for n in range(4):
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assert round(bbox_trans[n]) == result[n]
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def test_prefetcher():
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prefetcher = util.UrlPrefetcher()
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assert prefetcher.get_headers('bad_url') == {}
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# URL below will redirect once
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url = 'https://github.com/geopython/pygeoapi/raw/4a18393662583e53b8c7d591130246d9cd2c3f3f/pygeoapi/static/img/pygeoapi.png' # noqa
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headers = prefetcher.get_headers(url)
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length = int(headers.get('content-length', 0))
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assert length > 0
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# Test without redirect
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headers = prefetcher.get_headers(url, allow_redirects=False)
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assert headers.get('content-length') in (0, '0', None)
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assert headers.get('content-type') != 'image/png'
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# Test using redirect location from header
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headers = prefetcher.get_headers(headers['location'])
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assert int(headers.get('content-length', 0)) == length
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assert headers.get('content-type') == 'image/png'
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