Files
pygeoapi/aws-lambda
Just van den Broecke 7c6993719d add CRS Support for OGC API Feature pygeoapi Provider (#1174)
* OGC API - Features Part 2 (groundwork+CRS-BBOX) from PR #1155 - contributes to issue #1128

* #1128 provide conformance class for OAPIF Part 2 in /conformance page

* #1128 bitten by flake8...

* #1128 configurability CRS Feature Providers with syntax, defaults and tests

* #1128 configurability CRS Feature Providers refine for default values

* #1128 display supported CRSs in HTML Collection template

* #1128 config, mmetadata and tests for storageCRS and storageCrsCoordinateEpoch

* #1128 WIP for bbox-crs parameter support

* #1128 utility function and tests for default/mandatory supprted CRS list

* #1128 default supported CRS adaptation to OAPIF Part 2 standard

* #1128 grr flake8 whitespace

* #1128 start adding full API tests OGR for bbox-crs and crs parms

* #1128 fix flake8

* #1128 fix flake8 - install GDAL in workflow main for OGR tests

* #1128 fix flake8 - install GDAL in workflow main for OGR tests - need pip package?

* #1128 fix flake8 - install GDAL in workflow main for OGR tests - using libgdal-dev gdal-bin

* #1128 fix SensorThings test for main.yml Workflow

* #1128 fix SensorThings test for main.yml Workflow nr 2

* #1128 make all OGR tests working again

* #1128 make all OGR tests working again - flake8

* #1128 make all OGR tests working again - GeoSolutions WFS bbox

* #1128 #1155 add documentation for OGC OAPIF Part 2 CRS CRS BBOX support

* #1128 #1155 refine documentation for OGC OAPIF Part 2 CRS CRS BBOX support

* #1128 #1155 refine documentation to align with #1149

* #1128 #1155 rework from review OAS and pygeoapi config schema

* #1128 #1155 minor: compile Re for CRS URI only once as global var

* #1128 merge in changes from PR #1173 - fix missing import

* WIP Ogcapi features part 2 - Support for crs query parameter (#1149)

* feat(ogcapi_features_crs): start implementing crs support from ogcapi features part2

* Pass input and output CRSs WKT instead of crs transformation object

* fix longs lines and blank lines

* fix typo

* fix import for type annotation not supported by python version

* fix variable visibility in local scope

* fix tabs/spaces indentations

* Add support for the crs parameter to OGRProvider

* make flake8 happy

* Make crs transformation mechanism more consistent between PostgreSQL and OGR providers

* test(util): add two test functions in util.py

New functions: test_get_crs_from_uri and test_get_transform_from_crs

* fix too long lines...

* Update get_crs_from_uri and corresponding test function

* fix(get_crs_from_uri): make the error more explicit in if wrong crs uri format

* flake8 again...

* Keep support for source_srs/target_srs in config for OGRProvider

* revert changes made to pygeoapi-config-0.x.yml, overlap with PR 1155

* test: add test data and update test config file

* Extract 'crs' and 'storage_crs' and provider level instead of collection level

* feat(crs): new decorator to support coordinates transformation of feature collections

* feat(crs): 'crs' query parameter for CSVProvider

* test(crs): add tests for 'crs' query parameter

* test: update number of collections in test_describe_collections

* test: update number of collections in test_filter_dict_by_key_value

* fix(crs_transform): change the crs transformation decorator

Change the logic of the decorator so that it works for both functions that
return FeatureCollections and for functions tha return single Features.

* test: add tests for get_collection_item end-point with 'crs' parameter

* fix(test_get_collection_item_crs): id as path parameter, not query parameter

* test: unpack coordinates to create point geometry

* feat(crs): add suuport for crs query parameter for all providers of type 'feature'

* docs(crs): add documentation to illustrate use of 'crs' query parameters

* docs(crs): more data access examples

* fix typo and add new line

* refactor: specify None as default value for crs_transform_out parameter in _sqlalchemy_to_feature method

* changes for PR 1149, test_api and style formatting

* CRS84 as default crs also for test_get_collection_items_crs

* test(crs): test coordinates transformation implementation of PostgreSQLProvider

* test(crs): move tests to test_postgresql_provider

* fix test function calls

* change test to ensure returned features are the same

* add json format to request object

* test(crs): test coordinates transformation implementation of OGRProvider

* refactor(crs): make more compact get_collection_item and get_collection_items

Define two new static methods in API class, to create crs_transform_wkt and
setting content-crs header. These methods can be re-used in both
get_collection_item and get_collection_items methods and removes code
duplication.

---------

Co-authored-by: Just van den Broecke <just@justobjects.nl>

* #1178 fix flake8 error

* #1178 use EPSG:28992 i.s.o. 32631 - fix unit test OGR Shapefile

* #1174 use CRS-compliant Axis ordering for crs support

* #1174 fix and honour CRS 4258disable native CRS Transform in OGR Provider - Axis ordering not honoured...

* #1174 remove ADR tests rom test_util.py

* #1174 enable native CRS transform again in OGR Provider

* #1174 enable native CRS transform again in OGR Provider - fix config

* #1174 remove support for source/target_srs in OGRProvider - enforce transforms always based on storageCRS

* #1174 fix tests Postgresql Provider for Transforms

* #1174 fix tests Postgresql Provider for Transforms

* #1174 add tests for OGR Transformation and Axis Order

* #1174 Suppress potential axis-swapping in OGR ExportToJSON

* #1174 minor fix test - unassign spatialref before setgeom infeat

* #1174 minor fix test - unassign spatialref before setgeom infeat - flake8

* #1174 solve CI WFS test failures with GDAL HTTP config options

* #1174 bbox and bbox-crs defs local in openapi.py for CITE validators

* #1174 merge master - #1152 #1203 etc

* #1174 small doc changes

* #1174 move GeomObject typedef to beginning of util.py

* #1174 added debug logging in transform Decorator func

---------

Co-authored-by: Mathieu Tachon <92298764+MTachon@users.noreply.github.com>
2023-04-11 09:34:48 -04:00
..

Using pygeoapi on AWS Lambda Serverless

Overview

AWS Lambda Serverless is a service from Amazon that enables publishing code which is executed as on demand functions. The value is here is that the server is only working when requests are made, resulting in more efficient use of server resources as well as managing costs.

pygeoapi provides a couple of ways to publish to AWS Lambda depending on your environment: zappa and node/serverless.

zappa

zappa provides Python tooling to interact with AWS lambda. Ensure the environment variables AWS_ACCESS_KEY and AWS_SECRET_ACCESS_KEY are set and available.

# install zappa
pip install zappa

# set environment variables
export AWS_ACCESS_KEY_ID=foo
export AWS_SECRET_ACCESS_KEY=bar

# deploy pygeoapi to AWS Lambda
zappa deploy -s zappa_settings.json

# update
zappa update -s zappa_settings.json

# undeploy
zappa undeploy -s zappa_settings.json

node/serverless

The included serverless.yml and pygeoapi-serverless-config.yml can be used to deploy pygeoapi on AWS Lambda Serverless Environment.

This requires Amazon Credentials and the Serverless deployment tool.

AWS Credentials can be created following the instructions at https://serverless.com/framework/docs/providers/aws/guide/credentials/

Move serverless configs to root directory:

mv serverless.yml ..
mv pygeoapi-config.yml ..
cd ..

To install the Serverless environment

npm install serverless

The following serverless plugins are also used

serverless plugin install -n serverless-python-requirements
serverless plugin install -n serverless-wsgi

To test the application as a lambda locally:

serverless wsgi serve

To deploy to AWS Lambda:

serverless deploy

Once deployed, if you only need to update the code and not anything in the serverless configuration, you can update the function using:

serverless deploy function -f app

When deployed, the output will show the URL the app has been deployed to.

node/serverless lambda container

In the case where your pygeoapi instance is too large to deploy as a lambda function (250MB) you can build and deploy a docker image of pygeoapi with the lamda runtime interface installed.

Move serverless configs to root directory:

mv container/serverless.yml ../..
mv container/DockerFile ../..

*note the files below come from the serverless-wsgi node plugin, and ideally this should be part of a build process

cd container/
npm install serverless
serverless plugin install -n serverless-wsgi
mv node_modules/serverless-wsgi/serverless-wsgi.py ../..
mv node_modules/serverless-wsgi/wsgi_handler.py ../..
mv container/wsgi.py ../..
mv container/.serverless-wsgi ../..
rm -rf container/node_modules
cd ../..

to build docker container

docker build -t pygeo-lambda-container .

Once built, you need to deploy to ECR. This can also be accomplished with a change to the serverless configuration. Depending on environment permissions, you may need to create a ECR repo with appropriate policies first.

AWS_PROFILE=<profile name> aws ecr get-login-password --region <region> | docker login --username AWS --password-stdin <ECR repo url>
docker tag pygeo-lambda-container:latest <ECR repo url>:latest
docker push <ECR repo url>:latest

Deploy stack using serverless.

AWS_PROFILE=<profile name> sls deploy -s <stage name>