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pygeoapi/pygeoapi/provider/xarray_edr.py
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Tom Kralidis 951a1fb486 implement OGC EDR API (#658)
* implement OGC EDR API
* add docs/tests
* fix tests
2021-03-15 17:37:40 +02:00

167 lines
5.5 KiB
Python

# =================================================================
#
# Authors: Tom Kralidis <tomkralidis@gmail.com>
#
# Copyright (c) 2020 Tom Kralidis
#
# Permission is hereby granted, free of charge, to any person
# obtaining a copy of this software and associated documentation
# files (the "Software"), to deal in the Software without
# restriction, including without limitation the rights to use,
# copy, modify, merge, publish, distribute, sublicense, and/or sell
# copies of the Software, and to permit persons to whom the
# Software is furnished to do so, subject to the following
# conditions:
#
# The above copyright notice and this permission notice shall be
# included in all copies or substantial portions of the Software.
#
# THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND,
# EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES
# OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND
# NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT
# HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY,
# WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING
# FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR
# OTHER DEALINGS IN THE SOFTWARE.
#
# =================================================================
import logging
from pygeoapi.provider.base import ProviderNoDataError
from pygeoapi.provider.xarray_ import _to_datetime_string, XarrayProvider
LOGGER = logging.getLogger(__name__)
class XarrayEDRProvider(XarrayProvider):
"""EDR Provider"""
def __init__(self, provider_def):
"""
Initialize object
:param provider_def: provider definition
:returns: pygeoapi.provider.rasterio_.RasterioProvider
"""
XarrayProvider.__init__(self, provider_def)
self.instances = []
def get_fields(self):
"""
Get provider field information (names, types)
:returns: dict of dicts of parameters
"""
return self.get_coverage_rangetype()
def get_instance(self, instance):
"""
Validate instance identifier
:returns: `bool` of whether instance is valid
"""
return NotImplementedError()
def get_query_types(self):
"""
Provide supported query types
:returns: list of EDR query types
"""
return ['position']
def query(self, **kwargs):
"""
Extract data from collection collection
:param query_type: query type
:param wkt: `shapely.geometry` WKT geometry
:param datetime_: temporal (datestamp or extent)
:param select_properties: list of parameters
:param z: vertical level(s)
:param format_: data format of output
:returns: coverage data as dict of CoverageJSON or native format
"""
query_params = {}
LOGGER.debug('Query parameters: {}'.format(kwargs))
LOGGER.debug('Query type: {}'.format(kwargs.get('query_type')))
wkt = kwargs.get('wkt')
if wkt is not None:
LOGGER.debug('Processing WKT')
LOGGER.debug('Geometry type: {}'.format(wkt.type))
if wkt.type == 'Point':
query_params[self._coverage_properties['x_axis_label']] = wkt.x
query_params[self._coverage_properties['y_axis_label']] = wkt.y
elif wkt.type == 'LineString':
query_params[self._coverage_properties['x_axis_label']] = wkt.xy[0] # noqa
query_params[self._coverage_properties['y_axis_label']] = wkt.xy[1] # noqa
elif wkt.type == 'Polygon':
query_params[self._coverage_properties['x_axis_label']] = slice(wkt.bounds[0], wkt.bounds[2]) # noqa
query_params[self._coverage_properties['y_axis_label']] = slice(wkt.bounds[1], wkt.bounds[3]) # noqa
pass
LOGGER.debug('Processing parameter-name')
select_properties = kwargs.get('select_properties')
# example of fetching instance passed
# TODO: apply accordingly
instance = kwargs.get('instance')
LOGGER.debug('instance: {}'.format(instance))
datetime_ = kwargs.get('datetime_')
if datetime_ is not None:
query_params[self._coverage_properties['time_axis_label']] = datetime_ # noqa
LOGGER.debug('query parameters: {}'.format(query_params))
try:
if select_properties:
self.fields = select_properties
data = self._data[[*select_properties]]
else:
data = self._data
data = data.sel(query_params, method='nearest')
except KeyError:
raise ProviderNoDataError()
if len(data.coords[self.time_field].values) < 1:
raise ProviderNoDataError()
try:
height = data.dims[self.y_field]
except KeyError:
height = 1
try:
width = data.dims[self.x_field]
except KeyError:
width = 1
bbox = wkt.bounds
out_meta = {
'bbox': [bbox[0], bbox[1], bbox[2], bbox[3]],
"time": [
_to_datetime_string(data.coords[self.time_field].values[0]),
_to_datetime_string(data.coords[self.time_field].values[-1])
],
"driver": "xarray",
"height": height,
"width": width,
"time_steps": data.dims[self.time_field],
"variables": {var_name: var.attrs
for var_name, var in data.variables.items()}
}
return self.gen_covjson(out_meta, data, self.fields)